Infragistics JQuery controls

RapidMiner tutorial: How to explore correlations in your data to discover the relevance of attributes

What is correlation?

From wikipedia

In statistics, dependence refers to any statistical relationship between two random variables or two sets of data. Correlation refers to any of a broad class of statistical relationships involving dependence.

In laymans terms, correlation is a relationships between data attributes.  For a quick refresher, in data mining, a dataset is made up of different attributes.  We use these attributes to classify or predict a label.  Some attributes have more "meaning" or influence over the label's value.  As you can imagine, if you can determine the influence that specific attributes have over your data, you are in a better position to build a classification model because you will know which attributes you should focus on when building your model.  

In this example, I will use the kaggle.com Titanic datamining challenge dataset.  This post will not uncover any information that is not readily available in the tutorial posted on kaggle.com.

Here are two screenshots.  The first screenshot will show you some statistics about the dataset.  The second screenshot will show a sample of the data.

Meta data view of the Titanic data mining challenge Training dataset

A data view of the dataset

The correlation matrix

First start by importing the Titanic training dataset into RapidMiner.  You can use Read From CSV, Read From Excel, or Read from Database to achieve this step.  Next, search for the "Correlation Matrix" operator and drag it onto the process surface.  Connect the Titanic training dataset output port to the Correlation Matrix operator's input example port.  Your process should look like this.

 

Now run the process and observe the output.

You are presented with several different result views.  The first view will be the Correlation Matrix Attribute Weights view.  The Attribute weights view displays the "weight" of each attribute.  The purpose of this tutorial is to explain a different view of the Correlation matrix.  Click on the Correlation Matrix view.  This is a matrix that shows the Correlation Coefficients which is a measure of the strength of the relationship between our attributes.  An easy way to get started with the Correlation matrix is to notice that when an attribute intersects with itself, you have a dark blue cell with the value of 1 which represents the strongest possible value.  This is because any attribute matched with itself is a perfect correlation.  A correlation coefficient value can be positive or negative.  A negative value does not necessarily mean there is less of a relationship between the values represented.  The larger the coefficient in either direction represents a strong relationship between those two attributes.  If we look at the matrix and follow along the top row (survived) we will see the attributes that have the strongest correlation with the label in which we are trying to predict.

Just as the kaggle.com tutorial specifies, the attributes with the strongest correlation with the label (survived) are

sex(0.295), pclass(0.115), and fare(0.66) 

Remember that the value as well as the color will help you to visually identify the stronger correlation between attributes.

If you are working with a classification problem, I'm sure you can see how valuable the correlation matrix can be in showing you the relationships between your label and attributes.  Such insights let can provide a great start on where to focus your attention when building your classification model.

Thanks for reading and keep your eyes open for my next tutorial! 



Add comment

  Country flag


  • Comment
  • Preview
Loading

About the author

My name is Buddy James.  I'm a Microsoft Certified Solutions Developer from the Nashville, TN area.  I'm a Software Engineer, an author, a blogger (http://www.refactorthis.net), a mentor, a thought leader, a technologist, a data scientist, and a husband.  I enjoy working with design patterns, data mining, c#, WPF, Silverlight, WinRT, XAML, ASP.NET, python, CouchDB, RavenDB, Hadoop, Android(MonoDroid), iOS (MonoTouch), and Machine Learning. I love technology and I love to develop software, collect data, analyze the data, and learn from the data.  When I'm not coding,  I'm determined to make a difference in the world by using data and machine learning techniques. (follow me at @budbjames).  

Related links

Month List

refactorthis.net | Machine learning resources for .NET developers
Infragistics WPF controls

Machine learning resources for .NET developers

Machine learning for .NET

Greetings friends and welcome to this article on Machine learning libraries for .NET developers.  Machine learning is a hot topic right now and for good reason.  Personally, I haven't been so excited about a technology since my computer used my 2800 baud modem to dial into a BBS over 17 years ago.  The thought that my computer could communicate with another computer was so fascinating to me.  That moment was the very moment that would forever change my life.  I learned a lot about DOS by writing batch scripts and running other programs that allowed me to visit and then run a BBS system.  It eventually lead me to QBasic.  I wanted to learn to write BBS door games and QBasic was included as a part of a standard DOS installation back then.

Fast forward 17 years and I'm still in love with computers, programming, and the concept of communication between machines.  The magic never disappeared.  So when i first learned about the concept of Machine learning, I felt like that 13 year old kid again.  The idea that a machine can learn to do things that it has not been programmed to do is now a passion of mine.  The concepts of Machine learning have an extreme learning curve, however, I believe that we as humans can do anything that we put our mind to.  So I began looking around for tutorials on machine learning.  I found many great tutorials and books, however, most of them involved using python.  I have nothing against python.  As a matter of fact, I find it ironic that I started with BASIC and now in this moment of "rebirth" I'm beginning to use python which looks a lot like BASIC in many ways.  The fact of the matter remains, I'm a .NET developer.  I've spent the last 9 years in the .NET framework and I love the technology.  C# is an awesome programming language and it's hard to imagine life without Visual Studio.  What can I say, the IDE has spoiled me.

While I scoured the internet looking for tutorials related to Machine learning resources for .NET developers, I wished that there was a one resource that would assist me in my search for resources to help me achieve my goal.

Well that's what this article is all about.  In this article, I will introduce you to some .NET libraries that will assist you in your quest to learn about Machine learning.

NND Neural Network Designer by Bragisoft

The Neural Network Designer project (NND) is a DBMS management system for neural networks that was created by Jan Bogaerts.  The designer application is developed using WPF, and is a user interface which allows you to design your neural network, query the network, create and configure chat bots that are capable of asking questions and learning from your feed back.  The chat bots can even scrape the internet for information to return in their output as well as to use for learning.  The project includes a custom language syntax called NNL (neural network language) that you can use in configuring your machine learning project.  The source code is designed so that the libraries can be used in your own custom applications so you don't have to start from scratch with such a complex set of technologies.  The project is actually an open source project in which I am a part of.  Some of the possibilities offered by this awesome project include predictions, image and pattern recognition, value inspection, memory profiling and much more.  Stop by the Bragisoft NND website and download the application to give it a try

 Screen shots of the neural network designer by Bragisoft

A DBMS for neural networks

A DBMS for neural networks

 

Mind map rand forrest

Machine learning

The chat bot designer and other tools

GUIs and debuggers

Accord.net

Here is a description from the Accord.NET project website 

Accord.NET is a framework for scientific computing in .NET. The framework builds upon AForge.NET, an also popular framework for image processing, supplying new tools and libraries. Those libraries encompass a wide range of scientific computing applications, such as statistical data processing, machine learning, pattern recognition, including but not limited to, computer vision and computer audition. The framework offers a large number of probability distributions, hypothesis tests, kernel functions and support for most popular performance measurements techniques.

 The most impressive parts of this library has got to be the documentation and sample applications that are distributed with the project.  This makes the library easy to get started using.  I also like the ability to perform operations like Audio processing (beat detection and more), Video processing (easy integration with your web cam, vision capabilities and object recognition).  This is an excellent place to start with approaching Machine learning with the .NET framework.  Here are a two videos that should whet your appetite.

Hand writing recognition with Accord.NET

 

Here is an example of head tracking with Accord.NET (super cool)

 

AIMLBot Program# AILM Chat bot library

AIMLBot (Program#) is a small, fast, standards-compliant yet easily customizable implementation of an AIML (Artificial Intelligence Markup Language) based chatter bot in C#. AIMLBot has been tested on both Microsoft's runtime environment and Mono. Put simply, it will allow you to chat (by entering text) with your computer using natural language.  The project is located here.

Math.NET

Machine learning algorithms are extremely math heavy.  Math.NET is a library  that can assist with the math that is required to solve machine learning related problems.

Math.NET Numerics aims to provide methods and algorithms for numerical computations in science, engineering and every day use. Covered topics include special functions, linear algebra, probability models, random numbers, interpolation, integral transforms and more.

DotNumerics

DotNumerics is a website dedicated to numerical computing for .NET. DotNumerics includes a Numerical Library for .NET. The library is written in pure C# and has more than 100,000 lines of code with the most advanced algorithms for Linear Algebra, Differential Equations and Optimization problems. The Linear Algebra library includes CSLapack, CSBlas and CSEispack, these libraries are the translation from Fortran to C# of LAPACK, BLAS and EISPACK, respectively.

You can find the library here. 

ALGLIB

ALGLIB is a cross-platform numerical analysis and data processing library. It supports several programming languages (C++, C#, Pascal, VBA) and several operating systems (Windows, Linux, Solaris). ALGLIB features include:

Accessing ‘R’ from C#–Lessons learned

Here are instructions to use the R statistical framework from within c#

ILNumerics

You can check out the library at http://www.ilnumerics.net

NuML.net http://numl.net

A nice site about the basics of machine learning in c# by Seth Juarez . NuML.NET is a machine learning library for .NET developers written by Seth Juarez.  I've recently tried this library and I'm impressed!  Seth has stated publicly that his intention behind the numl.net library is to abstract the scary math away from machine learning to provide tools that are more approachable by software developers and boy did he deliver!  I've been working with this library for a little more than an hour and I've written a prediction app in c#.  You can find his numl.net library source on github.

Encog Machine Learning Framework

Here is what the official Heaton Research website has to say about Encog:

Encog is an advanced machine learning framework that supports a variety of advanced algorithms, as well as support classes to normalize and process data. Machine learning algorithms such as Support Vector Machines, Artificial Neural Networks, Genetic Programming, Bayesian Networks, Hidden Markov Models and Genetic Algorithms are supported. Most Encog training algoritms are multi-threaded and scale well to multicore hardware. Encog can also make use of a GPU to further speed processing time. A GUI based workbench is also provided to help model and train machine learning algorithms. Encog has been in active development since 2008.

Encog is available for Java, .Net and C/C++.

Jeff Heaton knows a great deal about machine learning algorithms and he's created a wonderful library called Encog.  I was able to write a neural network application that solved the classic XOR problem in 20 minutes after installing the library.  What really amazes me is that he has an Encog Library for JavaScript which includes live samples on his website of Javascript + encog solving problems like the Traveling Salesman Problem and Conway's game of life, all in a browser!  This library can even use your GPU for the heavy lifting if that's your choice.  I would highly recommend that you at least check out his site and download the library to look at the examples.  You can find the Encog library here

 

Conclusion

This concludes my article on Machine learning resources for the .NET developer.  If you have any suggestions regarding a project that you know of or you are working on related to Machine learning in .NET, please don't hesitate to leave a comment and I will update the article to mention the project.  This article has shown that we as .NET developers have many resources available to us to use to implement Machine learning based solutions.  I appreciate your time in reading this article and I hope you found it useful.  Please subscribe to my RSS feed.  Until next time..

Buddy James



Comments (6) -

Seth Juarez
Seth Juarez
3/4/2013 11:11:59 AM #

Hey! I also made something: http://numl.net.

Buddy James
Buddy James
3/9/2013 4:22:53 AM #

Seth,

Thank you for contributing.  I'm going to add your project to my list.

The code looks great.  The site design is really awesome too!  Kudos!

Buddy James

terrell26
terrell26
3/21/2013 12:44:32 PM #

You seem to know a great deal about this subject

Buddy James
Buddy James
3/21/2013 5:33:28 PM #

I appreciate the compliment.  I'm very passionate about machine learning and I'm constantly learning.

Thanks again!

Buddy James

Don Syme
Don Syme
7/2/2013 4:46:37 AM #

Great links!

For F# developers (or C# developers adding an F# project to their solution) see also  

    http://fsharp.org/machine-learning

Buddy James
Buddy James
7/4/2013 8:37:45 PM #

Thanks for reading @Don.  I hear great things about F# and machine learning.  F# is on my list of languages to learn.  Thanks again!

Buddy

Pingbacks and trackbacks (1)+

Add comment

  Country flag


  • Comment
  • Preview
Loading

About the author

My name is Buddy James.  I'm a Microsoft Certified Solutions Developer from the Nashville, TN area.  I'm a Software Engineer, an author, a blogger (http://www.refactorthis.net), a mentor, a thought leader, a technologist, a data scientist, and a husband.  I enjoy working with design patterns, data mining, c#, WPF, Silverlight, WinRT, XAML, ASP.NET, python, CouchDB, RavenDB, Hadoop, Android(MonoDroid), iOS (MonoTouch), and Machine Learning. I love technology and I love to develop software, collect data, analyze the data, and learn from the data.  When I'm not coding,  I'm determined to make a difference in the world by using data and machine learning techniques. (follow me at @budbjames).  

Related links

Month List

refactorthis.net | A blog dedicated to Microsoft technologies, .NET development articles, and tutorials
Infragistics WPF controls

Design and Document your Code using PDL (Programming Design Language)

Introduction Many of us underestimate the importance of proper code documentation through comments. Comments, when used correctly, can greatly increase the maintainability of your functions and routines, especially if there is any chance that another developer will ever need to look at your code. I... [More]


Why Learn Assembly Language?

Here is my post from http://www.codeproject.com/Articles/89460/Why-Learn-Assembly-Language "Assembly language? Isn't that the hard to read instructions on how to assemble your brand new computer desk?"... No.. What is Assembly Language? x86 Assembly is a programming... [More]


TDD using MSTest and Visual Studio 2010 Part one of two

Visual Studio 2010 and unit testing Unit testing has become a necessity in the world of software development.  Incorporating unit testing early and often into your build process can detect new bugs introduced into source code by recent changes from you or other developers.  This in turn w... [More]


About the author

My name is Buddy James.  I'm a Microsoft Certified Solutions Developer from the Nashville, TN area.  I'm a Software Engineer, an author, a blogger (http://www.refactorthis.net), a mentor, a thought leader, a technologist, a data scientist, and a husband.  I enjoy working with design patterns, data mining, c#, WPF, Silverlight, WinRT, XAML, ASP.NET, python, CouchDB, RavenDB, Hadoop, Android(MonoDroid), iOS (MonoTouch), and Machine Learning. I love technology and I love to develop software, collect data, analyze the data, and learn from the data.  When I'm not coding,  I'm determined to make a difference in the world by using data and machine learning techniques. (follow me at @budbjames).  

Related links

Month List